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1

How do endosymbionts become organelles? Understanding early events in plastid evolution

Debashish Bhattacharya, John M. Archibald, Andreas P.M. Weber, Adrian Reyes-Prieto

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 194 KB

english, 2007

2

Photosynthetic eukaryotes unite: endosymbiosis connects the dots

Debashish Bhattacharya, Hwan Su Yoon, Jeremiah D. Hackett

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 292 KB

english, 2004

3

The Origin and Establishment of the Plastid in Algae and Plants

Reyes-Prieto, Adrian, Weber, Andreas P.M., Bhattacharya, Debashish

Journal:

Annual Review of Genetics

Année:

2007

Langue:

english

Fichier:

PDF, 925 KB

english, 2007

4

Primary endosymbiosis and the evolution of light and oxygen sensing in photosynthetic eukaryotes

Rockwell, Nathan C., Lagarias, J. C., Bhattacharya, Debashish

Journal:

Frontiers in Ecology and Evolution

Année:

2014

Langue:

english

Fichier:

PDF, 4.63 MB

english, 2014

5

Genome Evolution of Coral Reef Symbionts as Intracellular Residents

González-Pech, Raúl A., Bhattacharya, Debashish, Ragan, Mark A., Chan, Cheong Xin

Journal:

Trends in Ecology & Evolution

Année:

2019

Langue:

english

Fichier:

PDF, 1.11 MB

english, 2019

6

Phytoplankton pangenome reveals extensive prokaryotic horizontal gene transfer of diverse functions

Fan, Xiao, Qiu, Huan, Han, Wentao, Wang, Yitao, Xu, Dong, Zhang, Xiaowen, Bhattacharya, Debashish, Ye, Naihao

Journal:

Science Advances

Année:

2020

Fichier:

PDF, 2.01 MB

2020

7

Uniting sex and eukaryote origins in an emerging oxygenic world

Jeferson Gross, Debashish Bhattacharya

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 1.08 MB

english, 2010

8

Hidden biodiversity of the extremophilic Cyanidiales red algae

CLAUDIA CINIGLIA, HWAN SU YOON, ANTONINO POLLIO, GABRIELE PINTO, DEBASHISH BHATTACHARYA

Journal:

Molecular Ecology

Année:

2004

Langue:

english

Fichier:

PDF, 475 KB

english, 2004

9

Complex phylogeographic patterns in the freshwater alga Synura provide new insights into ubiquity vs. endemism in microbial eukaryotes

SUNG MIN BOO, HAN SOON KIM, WOONGGHI SHIN, GA HUN BOO, SUNG MI CHO, BOK YEON JO, JEE-HWAN KIM, JIN HEE KIM, EUN CHAN YANG, PETER A. SIVER, ALEXANDER P. WOLFE, DEBASHISH BHATTACHARYA, ROBERT A. ANDERSE

Journal:

Molecular Ecology

Année:

2010

Langue:

english

Fichier:

PDF, 633 KB

english, 2010

10

ANALYSIS OF ALEXANDRIUM TAMARENSE (DINOPHYCEAE) GENES REVEALS THE COMPLEX EVOLUTIONARY HISTORY OF A MICROBIAL EUKARYOTE

Cheong Xin Chan, Marcelo B. Soares, Maria F. Bonaldo, Jennifer H. Wisecaver, Jeremiah D. Hackett, Donald M. Anderson, Deana L. Erdner, Debashish Bhattacharya

Journal:

Journal of Phycology

Année:

2012

Langue:

english

Fichier:

PDF, 1.25 MB

english, 2012

11

The Florida red tide dinoflagellate Karenia brevis: New insights into cellular and molecular processes underlying bloom dynamics

Frances M. Van Dolah, Kristy B. Lidie, Emily A. Monroe, Debashish Bhattacharya, Lisa Campbell, Gregory J. Doucette, Daniel Kamykowski

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 826 KB

english, 2009

12

Identification of a Marine Cyanophage in a Protist Single-cell Metagenome Assembly

Bhattacharya, Debashish, Price, Dana C., Bicep, Cedric, Bapteste, Eric, Sarwade, Mihir, Rajah, Veeran D., Yoon, Hwan Su

Journal:

Journal of Phycology

Année:

2013

Langue:

english

Fichier:

PDF, 477 KB

english, 2013

13

[Plant Systematics and Evolution] Origins of Algae and their Plastids Volume 11 || The origin of plastids and their spread via secondary symbiosis

Bhattacharya, Debashish

Année:

1997

Langue:

english

Fichier:

PDF, 5.12 MB

english, 1997

14

[Plant Systematics and Evolution] Origins of Algae and their Plastids Volume 11 || The complete sequence of the Cyanophora paradoxa cyanelle genome (Glaucocystophyceae)

Bhattacharya, Debashish

Année:

1997

Langue:

english

Fichier:

PDF, 2.05 MB

english, 1997

15

Single cell genome analysis of an uncultured heterotrophic stramenopile

Roy, Rajat S., Price, Dana C., Schliep, Alexander, Cai, Guohong, Korobeynikov, Anton, Yoon, Hwan Su, Yang, Eun Chan, Bhattacharya, Debashish

Journal:

Scientific Reports

Année:

2014

Langue:

english

Fichier:

PDF, 1.49 MB

english, 2014

16

Evidence of ancient genome reduction in red algae (Rhodophyta)

Qiu, Huan, Price, Dana C., Yang, Eun Chan, Yoon, Hwan Su, Bhattacharya, Debashish, Valentin, K.

Journal:

Journal of Phycology

Année:

2015

Langue:

english

Fichier:

PDF, 763 KB

english, 2015

17

Endosymbiotic and horizontal gene transfer in microbial eukaryotes

Chan, Cheong Xin, Bhattacharya, Debashish, Reyes-Prieto, Adrian

Journal:

Mobile Genetic Elements

Année:

2012

Langue:

english

Fichier:

PDF, 1.95 MB

english, 2012

18

Protein networks identify novel symbiogenetic genes resulting from plastid endosymbiosis

Méheust, Raphaël, Zelzion, Ehud, Bhattacharya, Debashish, Lopez, Philippe, Bapteste, Eric

Journal:

Proceedings of the National Academy of Sciences

Année:

2016

Langue:

english

Fichier:

PDF, 1.10 MB

english, 2016

19

Biotic Host–Pathogen Interactions As Major Drivers of Plastid Endosymbiosis

Cenci, Ugo, Bhattacharya, Debashish, Weber, Andreas P.M., Colleoni, Christophe, Subtil, Agathe, Ball, Steven G.

Journal:

Trends in Plant Science

Année:

2017

Langue:

english

Fichier:

PDF, 5.88 MB

english, 2017

20

Extensive horizontal gene transfers between plant pathogenic fungi

Qiu, Huan, Cai, Guohong, Luo, Jing, Bhattacharya, Debashish, Zhang, Ning

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 1.65 MB

english, 2016

21

Sequence similarity network reveals the imprints of major diversification events in the evolution of microbial life

Cheng, Shu, Karkar, Slim, Bapteste, Eric, Yee, Nathan, Falkowski, Paul, Bhattacharya, Debashish

Journal:

Frontiers in Ecology and Evolution

Année:

2014

Langue:

english

Fichier:

PDF, 4.86 MB

english, 2014

22

Terpene Biosynthesis in Red Algae is Catalyzed by Microbial Type but not Typical Plant Terpene Synthases

Wei, Guo, Jia, Qidong, Chen, Xinlu, Köllner, Tobias G, Bhattacharya, Debashish, Wong, Gane Ka-Shu, Gershenzon, Jonathan, Chen, Feng

Journal:

PLANT PHYSIOLOGY

Année:

2018

Langue:

english

Fichier:

PDF, 1.52 MB

english, 2018

23

Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida

Ferrari, Camilla, Proost, Sebastian, Janowski, Marcin, Becker, Jörg, Nikoloski, Zoran, Bhattacharya, Debashish, Price, Dana, Tohge, Takayuki, Bar-Even, Arren, Fernie, Alisdair, Stitt, Mark, Mutwil, Ma

Journal:

Nature Communications

Année:

2019

Langue:

english

Fichier:

PDF, 2.79 MB

english, 2019

24

Correlation between Organelle Genetic Variation and RNA Editing in Dinoflagellates Associated with the Coral Acropora digitifera

Shoguchi, Eiichi, Yoshioka, Yuki, Shinzato, Chuya, Arimoto, Asuka, Bhattacharya, Debashish, Satoh, Noriyuki, McFadden, Geoff

Journal:

Genome Biology and Evolution

Année:

2020

Fichier:

PDF, 462 KB

2020

25

Analysis of the Distribution of Bootstrap Tree Lengths Using the Maximum Parsimony Method

Debashish Bhattacharya

Journal:

Molecular Phylogenetics and Evolution

Année:

1996

Langue:

english

Fichier:

PDF, 234 KB

english, 1996

26

The Distribution of Group I Introns in Lichen Algae Suggests That Lichenization Facilitates Intron Lateral Transfer

Thomas Friedl, Anja Besendahl, Patrick Pfeiffer, Debashish Bhattacharya

Journal:

Molecular Phylogenetics and Evolution

Année:

2000

Langue:

english

Fichier:

PDF, 229 KB

english, 2000

27

Phylogeny of Alariaceae, Laminariaceae, and Lessoniaceae (Phaeophyceae) Based on Plastid-Encoded RuBisCo Spacer and Nuclear-Encoded ITS Sequence Comparisons

Hwan Su Yoon, Ju Yeon Lee, Sung Min Boo, Debashish Bhattacharya

Journal:

Molecular Phylogenetics and Evolution

Année:

2001

Langue:

english

Fichier:

PDF, 147 KB

english, 2001

28

Inhibitory property of the Piper betel phenolics against photosensitization-induced biological damages

Soumyaditya Mula, Debashish Banerjee, Birija S. Patro, Sayanti Bhattacharya, Atanu Barik, Sandip K. Bandyopadhyay, Subrata Chattopadhyay

Journal:

Bioorganic & Medicinal Chemistry

Année:

2008

Langue:

english

Fichier:

PDF, 199 KB

english, 2008

29

Phylogeny of Calvin cycle enzymes supports Plantae monophyly

Adrian Reyes-Prieto, Debashish Bhattacharya

Journal:

Molecular Phylogenetics and Evolution

Année:

2007

Langue:

english

Fichier:

PDF, 766 KB

english, 2007

30

Interrelationships of chromalveolates within a broadly sampled tree of photosynthetic protists

Valérie C. Reeb, Michael T. Peglar, Hwan Su Yoon, Jennifer Ruoyu Bai, Min Wu, Philip Shiu, Jessie L. Grafenberg, Adrian Reyes-Prieto, Susanne E. Rümmele, Jeferson Gross, Debashish Bhattacharya

Journal:

Molecular Phylogenetics and Evolution

Année:

2009

Langue:

english

Fichier:

PDF, 364 KB

english, 2009

31

EVOLUTIONARY ANALYSES OF SMALL-SUBUNIT rDNA CODING REGIONS AND THE 1506 GROUP I INTRONS OF THE ZYGNEMATALES (CHAROPHYCEAE, STREPTOPHYTA)

Anja Besendahl, Debashish Bhattacharya

Journal:

Journal of Phycology

Année:

1999

Langue:

english

Fichier:

PDF, 254 KB

english, 1999

32

PLANT ORIGIN

Debashish Bhattacharya

Journal:

Journal of Phycology

Année:

2000

Langue:

english

Fichier:

PDF, 131 KB

english, 2000

33

ACTIN GENE DUPLICATION AND THE EVOLUTION OF MORPHOLOGICAL COMPLEXITY IN LAND PLANTS

Debashish Bhattacharya, John Aubry, Erik C. Twait, Stefanie Jurk

Journal:

Journal of Phycology

Année:

2000

Langue:

english

Fichier:

PDF, 486 KB

english, 2000

34

PHYLOGENETIC EVIDENCE FOR THE CRYPTOPHYTE ORIGIN OF THE PLASTID OF DINOPHYSIS (DINOPHYSIALES, DINOPHYCEAE)

Jeremiah D. Hackett, Lucie Maranda, Hwan Su Yoon, Debashish Bhattacharya

Journal:

Journal of Phycology

Année:

2003

Langue:

english

Fichier:

PDF, 461 KB

english, 2003

35

Endosymbiont or host: who drove mitochondrial and plastid evolution?

Jeferson Gross, Debashish Bhattacharya

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 877 KB

english, 2011

36

Restriction enzyme analysis of variation and taxonomy in the kelp genusLaminaria(Laminariales, Phaeophyta)

Debashish Bhattacharya, Louis D. Druehl

Journal:

Année:

1990

Langue:

english

Fichier:

PDF, 419 KB

english, 1990

37

Molecular genetic analysis of variation inCostaria costata(Turner) Saunders

Debashish Bhattacharya, Louis D. Druehl

Journal:

Année:

1987

Langue:

english

Fichier:

PDF, 333 KB

english, 1987

38

Analyses of ribosomal RNA sequences from glaucocystophyte cyanelles provide new insights into the evolutionary relationships of plastids

Thomas A. Helmchen, Debashish Bhattacharya, Michael Melkonian

Journal:

Journal of Molecular Evolution

Année:

1995

Langue:

english

Fichier:

PDF, 881 KB

english, 1995

39

Sequence analysis of duplicated actin genes inLagenidium giganteumandPythium irregulare(Oomycota)

Debashish Bhattacharya, Shawn K. Stickel

Journal:

Journal of Molecular Evolution

Année:

1994

Langue:

english

Fichier:

PDF, 863 KB

english, 1994

40

Population analysis of the kelpCostaria costata(Phaeophyta) using a polymorphic ribosomal DNA probe

Debashish Bhattacharya, David L. Baillie, Louis D. Druehl

Journal:

Plant Systematics and Evolution

Année:

1990

Langue:

english

Fichier:

PDF, 1.67 MB

english, 1990

41

Molecular phylogenetic analysis of actin genic regions fromAchlya bisexualis(Oomycota) andCostaria costata(Chromophyta)

Debashish Bhattacharya, Shawn K. Stickel, Mitchell L. Sogin

Journal:

Journal of Molecular Evolution

Année:

1991

Langue:

english

Fichier:

PDF, 1.05 MB

english, 1991

42

Actin Phylogeny IdentifiesMesostigma virideas a Flagellate Ancestor of the Land Plants

Debashish Bhattacharya, Klaus Weber, Seon Sook An, Wolfgang Berning-Koch

Journal:

Journal of Molecular Evolution

Année:

1998

Langue:

english

Fichier:

PDF, 1.57 MB

english, 1998

43

Vertical Evolution and Intragenic Spread of Lichen-Fungal Group I Introns

Debashish Bhattacharya, Thomas Friedl, Gert Helms

Journal:

Journal of Molecular Evolution

Année:

2002

Langue:

english

Fichier:

PDF, 336 KB

english, 2002

44

Phylogeny and Self-Splicing Ability of the Plastid tRNA-Leu Group I Intron

Dawn Simon, David Fewer, Thomas Friedl, Debashish Bhattacharya

Journal:

Journal of Molecular Evolution

Année:

2003

Langue:

english

Fichier:

PDF, 389 KB

english, 2003

45

Divergent Histories of rDNA Group I Introns in the Lichen Family Physciaceae

Dawn Simon, Jessica Moline, Gert Helms, Thomas Friedl, Debashish Bhattacharya

Journal:

Journal of Molecular Evolution

Année:

2005

Langue:

english

Fichier:

PDF, 449 KB

english, 2005

46

Comparative Analysis of the Complete Plastid Genome Sequence of the Red AlgaGracilaria tenuistipitatavar.liuiProvides Insights into the Evolution of Rhodoplasts and Their Relationship to Other Plastids

Jonathan C. Hagopian, Marcelo Reis, João P. Kitajima, Debashish Bhattacharya, Mariana C. de Oliveira

Journal:

Journal of Molecular Evolution

Année:

2004

Langue:

english

Fichier:

PDF, 360 KB

english, 2004

47

Evolution ofPleopsidium(Lichenized Ascomycota) S943 Group I Introns and the Phylogeography of an Intron-Encoded Putative Homing Endonuclease

Valérie Reeb, Peik Haugen, Debashish Bhattacharya, François Lutzoni

Journal:

Journal of Molecular Evolution

Année:

2007

Langue:

english

Fichier:

PDF, 609 KB

english, 2007

48

A Three-Gene Dinoflagellate Phylogeny Suggests Monophyly of Prorocentrales and a Basal Position forAmphidiniumandHeterocapsa

Huan Zhang, Debashish Bhattacharya, Senjie Lin

Journal:

Journal of Molecular Evolution

Année:

2007

Langue:

english

Fichier:

PDF, 373 KB

english, 2007

49

Molecular Evolution of Calmodulin and Calmodulin-Like Genes in the CephalochordateBranchiostoma

Anton Karabinos, Debashish Bhattacharya

Journal:

Journal of Molecular Evolution

Année:

2000

Langue:

english

Fichier:

PDF, 807 KB

english, 2000

50

Extensive Ribosomal DNA Genic Variation in the Columnar CactusLophocereus

Stefanie Hartmann, John D. Nason, Debashish Bhattacharya

Journal:

Journal of Molecular Evolution

Année:

2001

Langue:

english

Fichier:

PDF, 795 KB

english, 2001